Protein Information

Protein ZmZIM30
ZmZIM30 is a protein in the ZIM family.
Information
TF Name:	ZmZIM30
Species:	Maize
TF Family:	ZIM
Gene Name(Synonym):	ZIM30
Uniprot ID:	A0A1D6PDQ1

Overview of domains present in v5 transcripts
	PF06200	PF09425
Zm00001eb223590_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d014250	DAPseq	sequence	fimo	position
Zm00001d014250	DAPseq	sequence	fimo	position
Zm00001d014250	ChIPseq	sequence	fimo	position
Zm00001d014250	PChIPseq	sequence	fimo	position

Zm00001eb223590_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MSAATGYSRFLRQYMREPQRHQLVEAEETDSGRTMQLFPTRAGGGTSSSSHEQSDDGAQAANKATLSIFYEGRMLVFEEF
PADKAKALMQLAAGSSGSSSAAAPNNKDAPVPVVRVRRVPEQPAATAPLAVVPSDLLPIARKVSLQRFLQKRKERIAATE
PYPEPEKDDVPATATATATGWQATALKDKPAPASWLGL

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF06200
PF09425
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Nucleotide Sequence
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AGCTAGCTAGCTACTCCTACTCGTA...

AC197764.4_FGT003 from maize genome v3

Related TFome: pUT6146

Amino Acid Sequence
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MSAATGYSRFLRQYMREPQRHQLVEAEETDSGRTMQLFPTRAGGGTSSSSHEQSDDGAQAANKATLSIFYEGRMLVFEEF
PADKAKALMQLAAGSSGSSSAAAPNNKDAPVPVVRVRRVPEQPAATAPLAVVPSDLLPIARKVSLQRFLQKRKERIAATE
PYPEPEKDDVPATATATATGWQATALKDKPAPASWLGL

Nucleotide Sequence
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ATGTCGGCCGCCACTGGTTACAGCC...

Zm00001d014250_T001 from maize genome v4

Amino Acid Sequence
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MREPQRHQLVEAEETDSGRTMQLFPTRAGGGTSSSSHEQSDDGAQAANKATLSIFYEGRMLVFEEFPADKAKALMQLAAG
SSGSSSAAAPNNKDAPVPVVRVRRVPEQPAATAPLAVVPSDLLPIARKVSLQRFLQKRKERIAATEPYPEPEKDDVPATA
TATATGWQATALKDKPAPASWLGL

Nucleotide Sequence
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GCGGCAGTACATGAGAGAGCCGCAG...

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Protein ZmZIM30

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmZIM30 is the regulator

Interactions where ZmZIM30 is the target
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Zm00001eb223590_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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AC197764.4_FGT003 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d014250_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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